PC to Mac

Yup, I’ve caved. I’ve been a PC user all my life, but the one I’ve had for the past several years has been slowly and steadily grinding to a halt, while my digital work load has equally been consistently rising, so it was time for a change. While I get the impression that switching to Mac is the new ‘in’ thing these days - IP has noted that new converts often favor style over functionality (and Macs are pretty, without a doubt) - my main reason was much more simple: it’s true, Macs generally do tend to be more stable, secure, and easy to use, and now with Boot Camp, I’m running Windows as well. There’s nothing to lose and a whole lot to gain, and for people like me who treat life as one giant optimization problem, that’s a big deal. Indeed, making the transition, transferring data, getting comfortable with (mostly) everything, &c. took under a week. Here’s how I do my ‘basic’ tasks…

- Presentations/Word Processing: MS Powerpoint & MS Word 2004. while I’ve heard good things about iWork, I went with MS Office simply because, at the end of the day, most of the files I work with (e.g. in collaborations) are Office files, and I wanted to make sure that I was 100% compatible (even though from what I hear, there aren’t too many major compatibility issues). I’m slightly regretting this now on the Word front (Powerpoint I can live with) - it’s notoriously slow at times. I’m trying to wait it out until Office 2008 for Mac comes out, but I may end up shelling out some more and get Pages (or something free, like OpenOffice).

- E-mail/Calendar: Apple Mail/iCal. Like everything else that came along with this machine, these are wonderful. Plus I can sync the iCal to my iPod, which is great (although I really do hate all these ‘i-’ prefixes).

- RSS reader: Vienna. Open-source, freeware, sleek, built-in browser, and tons of functionality. Works great.

- Plotting data: OriginLab/Plot/Apple Grapher. I’ve always used OriginLab for data analysis, making figures, &c. so I decided to install it on my Windows partition (sadly, no Mac version). However, I recently discovered Plot (a freeware program) and the built-in Grapher app, both of which are wonderful for making high-quality figures, both 2d and 3d. They’re very bare bones, which is great for what I use them for (I fought with Origin for a half hour the other day trying to format a polar plot correctly, whereas Grapher took five minutes to do the same thing).

- General data analysis: OriginLab/Igor Pro. Our lab has a license for Origin, and it’s what I’ve always used, so I installed it - but I wanted something I could run on my Mac as well, without having to switch to the Windows partition. I’ve hear some good things about Igor, and their amazing student personal purchase deal made it economical enough to buy. Haven’t had much chance to play around with it, though.

- AFM/SPM image analysis: Gwyddion, sometimes Image SXM. I do a lot of AFM/SPM image processing and analysis, and have so far tended to use Veeco’s Nanoscope software (again, which isn’t supported on Mac). I’m happy about that though, because I don’t think I would’ve ever bothered to try out Gwyddion, which is a wonderful piece of software. It’s freeware, has just about every kind of functionality imaginable, and best of all: it tells you what it’s doing (with excellent supporting documentation). Installing it is somewhat involved, but not too difficult. (The only major point to note is that Gwyddion for Mac OS X needs X11, which comes on the Mac installer disk). Oh, and before I installed Gwyddion I played around with Image SXM a bit, too - pretty nice as well, but I’m far more impressed with Gwyddion.

- Graphics: GIMP (the GNU image manipulation program). I used to use Adobe Photoshop for all my graphics needs, but it’s ridiculously expensive. This program does, as far as I can tell, pretty much everything Photoshop does - for free. (Again, like Gwyddion, it uses X11, which is a tool OS X uses to run certain open source programs). The only issue is that it’s not that great with certain very simple tasks, like - of all things - drawing a circle.

- Lab Notebook: VoodooPad. Another great free program with a ton of functionality - basically like a personal wiki that I plan to use as a lab notebook, but I haven’t used it enough to pass judgement. Very easy to use, though.

- Organizing Papers: Zotero. I tried the much-raved about Papers for a bit, but soon quit, because they only supported PubMed (which only includes a fraction of the journals I read). Now that they include Web of Science I’d be more inclined to stick with them, but Zotero’s been serving me wonderfully. It’s a simple firefox plug-in that supports pretty much every publisher I’ve encountered. It downloads a paper’s metadata (author list, journal, abstract, etc.) with a click of a button, and lets you store the paper as an attachment, too. Only two issues are (i) integration with Word is poor, but I can easily export my Zotero citations as an endnote file and use endnote to put in citations, as I’ve done before; (ii) data is only stored on this computer, not on some central server somewhere (although they claim to be working on including this, which will be great).

- Windows-in-Mac: None at the moment. A number of programs exist that enable one to use the Windows partition while in conventional Mac mode. I tried CrossOver briefly, but it didn’t work all that great. I plan on giving Parallels Desktop a shot at some point, but frankly, I haven’t really needed Windows all that much. (Which is probably the take-home message from this experience…)

Of course, if anyone has suggestions for good software or simply personal favorites, I’d love to hear about them.

All in all, no complaints so far, except for one, which is a slightly big one that I’m not sure what I’ll do about: it turns out that my laptop doesn’t work with certain kinds of projectors, which sucks when I have to give a talk. Quick googling reveals that this is a problem with many MacBooks, and that not much has been done to acknowledge or fix the problem, which is ridiculous. Particularly since I have to give a talk at a conference in a week or so… I’ll probably have to pdf it and carry it on a USB drive just in case things don’t work out, which stinks (and is definitely not a long-term solution).

~ by Sujit on November 19, 2007.